BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008H08SP1|AL425944
(793 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1757 1463 0.0
>3x_Contig1757
Length = 24754
Score = 1463 bits (732), Expect = 0.0
Identities = 775/793 (97%), Gaps = 2/793 (0%)
Strand = Plus / Minus
Query: 1 acgttagtntcaggtggatctttgttatcaagaatatactttgggaaatagtcaagatac 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19664 acgttagt-tcaggtggatctttgttatcaagaatatactttgggaaatagtcaagatac 19606
Query: 61 agttttgtagtttatggtcgtatctttttatagaaaagaattcgagaagacggaaaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19605 agttttgtagtttatggtcgtatctttttatagaaaagaattcgagaagacggaaaaaaa 19546
Query: 121 atactatacaatgtatcggtaactatcctgacgtgtgatgtccactagtattatccagtg 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19545 atacta-acaatgtatcggtaactatcctgacgtgtgatgtccactagtattatccagtg 19487
Query: 181 acaggcaagtgattgtttggtacaacttgattccttcagcattccttaaatatacacagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19486 acaggcaagtgattgtttggtacaacttgattccttcagcattccttaaatatacacagt 19427
Query: 241 gaaaagaattggttaaactaatgcttttctcgatttgtcaaaatcaaatgctaatttcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19426 gaaaagaattggttaaactaatgcttttctcgatttgtcaaaatcaaatgctaatttcag 19367
Query: 301 atacaccgggtaacaactgacataatcacatcgatctttatctttctcattagaatagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19366 atacaccgggtaacaactgacataatcacatcgatctttatctttctcattagaatagta 19307
Query: 361 ggacatgattaggttgaagctatctttcaatatttacacagaggtaggggtagatattta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19306 ggacatgattaggttgaagctatctttcaatatttacacagaggtaggggtagatattta 19247
Query: 421 aatattatgcaatgatccaaccacctgggagtggaataaatacaaaagtccgtttatagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19246 aatattatgcaatgatccaaccacctgggagtggaataaatacaaaagtccgtttatagt 19187
Query: 481 gttttaagccctgattggatattcttacacgatgcacacgatgtcccctggacacaaaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19186 gttttaagccctgattggatattcttacacgatgcacacgatgtcccctggacacaaaac 19127
Query: 541 gcacaccaacaacaggaatgaatgaatatvatgataatgataatrataataatrttkttt 600
||||||||||||||||||||||||||||| |||||||||||||| |||||||| | |
Sbjct: 19126 gcacaccaacaacaggaatgaatgaatataatgataatgataataataataataataata 19067
Query: 601 tgkkawawcataawttgagggctcttttttctctggtcgtgttggcagctggcagtcata 660
| | | ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19066 agttaaaacataatttgagggctcttttttctctggtcgtgttggcagctggcagtcata 19007
Query: 661 tatatattatgtcttaagckttcataaaaaaactctgcactctcagataggctctatcct 720
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 19006 tatatattatgtcttaagctttcataaaaaaactctgcactctcagataggctctatcct 18947
Query: 721 accaataagaacagcgttccaacatgtatcgtcagtagagaaaaaaanagaggagaataa 780
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 18946 accaataagaacagcgttccaacatgtatcgtcagtagaaaaaaaaaaagaggagaataa 18887
Query: 781 tgagggatgaagt 793
|||||||||||||
Sbjct: 18886 tgagggatgaagt 18874
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6424
Number of Sequences: 1807
Number of extensions: 6424
Number of successful extensions: 157
Number of sequences better than 1.0e-20: 1
length of query: 793
length of database: 10,358,551
effective HSP length: 16
effective length of query: 777
effective length of database: 10,329,639
effective search space: 8026129503
effective search space used: 8026129503
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)